ade1 ade16 ade2 (haploid) aep2 afg3 (haploid) ald5 anp1 aqy2-a aqy2-b ard1 "are1, are2 (haploid)" "arg5,6" arg80 ase1 (**12) ate1 bim1 (**15) bni1 (haploid) "bub1 (haploid **2,10)" bub2 "bub3 (**2,8,13)" bub3 (haploid **2) bul1 cat8 cbp2 cem1 cin5 cka2 ckb2 cla4 (haploid) clb2 clb6 cmk2 "cna1, cna2 (haploid)" cnb1 cue1 cup5 cyc2 cyt1 dfr1 dig1 "dig1, dig2" "dig1, dig2 (haploid)" dig2 dot4 eca39 ecm1 (**3) ecm10 ecm18 (**7) ecm29 ecm31 ecm34 eft2 erd1 erg2 erg3 (haploid) erg4 (haploid **7) erg5 erg6 erp2 erp4 far1 (haploid) fks1 (haploid) fpr1 fre6 fus2 fus3 (haploid) "fus3, kss1 (haploid)" gal83 gas1 gcn4 gfd1 gln3 gpa2 gyp1 hat2 hda1 hdf1 hes1 (haploid) hir2 his1 hmg1(haploid) hog1 (haploid) hpa3 hpt1 hst3 imp2 imp2' (**12) isw1 "isw1, isw2" isw2 jnm1 kim4 kin3 kre1 kss1 (haploid) mac1 mad2 mak10 mbp1 med2 (haploid) mnn1 mrpl33 mrt4 msu1 npr2 nrf1 nta1 ost3 pac2 pau2 pch1 pcl6 pep12 pet111 pet117 pet127 pex12 pfd2 (**14) phd1 (haploid) ppr1 prb1 qcr2 (haploid) rad27 rad57 rad6 (haploid) ras1 ras1 (haploid) ras2 (haploid) rgt1 rip1 rml2 (**13) rnh1 rnr1 (haploid **9) rpd3 (haploid) rpl12a rpl20a rpl27a (**4) rpl34a (**9) rpl6b rpl8a rps24a (**9) rps24a (haploid) rps27b (**11) rrp6 rtg1 rts1 rvs161 (haploid) sap1 sap18 sap30 sbh2 sbp1 scs7 sgs1 sgt2 she4 sin3 sir1 sir2 sir3 sir4 sod1 (haploid) spf1 ssn6 (haploid) sst2 (haploid) stb4 ste11 (haploid) ste12 (haploid) ste18 (haploid) ste2 (haploid) ste20 (**11) ste24 (haploid) ste4 (haploid) ste5 (haploid) ste7 (haploid) swi4 swi5 swi6 (haploid) tec1 (haploid) tom6 top1 (haploid) top3 (haploid) tup1 (haploid) ubp8 ubr1 ubr2 utr4 vac8 vma8 vps21 vps8 whi2 yaf1 yal004w yap1 yap3 yap7 yar014c yar030c yea4 yel001c yel008w yel010w yel020c yel028w yel033w yel044w yel047c yel059w yel067c yer002w yer024w yer030w yer033c yer034w yer041w yer044c (haploid) yer050c yer066c-a yer067c-a yer071c yer083c yer084w yer085c CMD1 (tet promoter) yhl013c yhl029c yhl042w yhl045w yhr011w (**14) yhr022c yhr031c yhr034c yhr039c yil037c (haploid) yil117c (haploid) yjl107c (haploid) yml003w yml005w yml011c yml018c yml033w yml034w ymr009w ymr010w ymr014w ymr025w ymr029c ymr030w ymr031c ymr031w-a ymr034c ymr040w ymr041c ymr044w ymr140w ymr141c ymr145c ymr147w ymr187c ymr237w ymr244c-a ymr258c ymr269w ymr285c ymr293c ynd1 yor006c yor009w yor015w yor021c yor051c (**14) yor072w yor078w yor080w (**3) ypl216w zds1 AUR1 (tet promoter) CDC42 (tet promoter) ERG11 (tet promoter) FKS1 (tet promoter) HMG2 (tet promoter) IDI1 (tet promoter) KAR2 (tet promoter) PMA1 (tet promoter) RHO1 (tet promoter) YEF3 (tet promoter) 2-deoxy-D-glucose Calcofluor white Cycloheximide Doxycycline "FR901,228" Glucosamine HU Itraconazole Lovastatin MMS Nikkomycin Terbinafine Tunicamycin ylr098c deletion ybl054w deletion ykl062w deletion yer051w deletion ylr176c deletion ykl032c deletion yjl176c deletion yjr060w deletion ypr008w deletion yhl009c deletion ypl001w deletion ymr273c deletion yol028c deletion ykl020c deletion yor344c deletion yor028c deletion ypr199c deletion ypl049c deletion ybl021c deletion yer109c deletion yir033w deletion ypl129w deletion ynl236w deletion yjr122w deletion yml051w deletion yor140w deletion ypl042c deletion yel056w deletion ypl177c deletion ymr070w deletion ydr169c deletion yml102w deletion yol116w deletion ypl248c deletion ygr056w deletion ymr042w deletion ykl185w deletion ybr182c deletion yhr206w deletion ymr182c deletion yir018w deletion ynl330c deletion yil119c deletion ydr173c deletion ygl023c deletion ygr097w deletion yor038c deletion yhl020c deletion ybr289w deletion ynr052c deletion ykr099w deletion ylr357w deletion yor113w deletion yjl168c deletion ydr477w deletion ypr196w deletion yml081w deletion ykr034w deletion ycr081w deletion ybl066c deletion ylr182w deletion yor229w deletion ynl257c deletion ygl035c deletion ydr443c deletion yor290c deletion ybr083w deletion yer184c deletion ydr423c deletion yor363c deletion yhl025w deletion ykl015w deletion ydr253c deletion ymr019w deletion ykl005c deletion yol108c deletion ygl096w deletion yer161c deletion yfl044c deletion ybr245c deletion yol051w deletion ydr181c deletion ygl244w deletion yir023w deletion ygr249w deletion ydr191w deletion ygl025c deletion yol068c deletion ymr053c deletion ydr421w deletion yfr034c deletion ylr442c deletion ypr022c deletion ymr164c deletion ypl230w deletion ybl103c deletion ydr146c deletion ydr049w deletion yfl031w deletion ynl139c deletion ykl109w deletion ydl056w deletion ydr216w deletion ylr039c deletion yor380w deletion ypr193c deletion ybr297w deletion yer068w deletion yel009c deletion ygl162w deletion ydl170w deletion ydr277c deletion ylr113w deletion ypr054w deletion yor298c-a deletion yml099c deletion ypr009w deletion ynl199c deletion yor025w deletion ymr021c deletion ygl131c deletion ylr418c deletion ypl133c deletion ygl237c deletion ygr044c deletion yfl021w deletion yil131c deletion yhr154w deletion ynl309w deletion ykr064w deletion ymr016c deletion ydr448w deletion ydr259c deletion ydr043c deletion yor230w deletion yor032c deletion ycl055w deletion ymr037c deletion ygr089w deletion ybl052c deletion ygr104c deletion yjr127c deletion yfl052w deletion ydr026c deletion yol004w deletion ynl204c deletion ypl202c deletion yor191w deletion yhr178w deletion ypl038w deletion yjl110c deletion ydr176w deletion ylr451w deletion yhr006w deletion ypl139c deletion ynl167c deletion ynl314w deletion ylr014c deletion yjl127c deletion yor162c deletion yir017c deletion ygl013c deletion yor304w deletion ybl005w deletion yil010w deletion ylr228c deletion ykl043w deletion yer130c deletion ycr084c deletion ydr213w deletion ybr195c deletion ycr106w deletion yjr147w deletion ykr036c deletion ydr363w deletion yml113w deletion ydl042c deletion ydr310c deletion ynl021w deletion ydl070w deletion ybl008w deletion yer169w deletion ydr207c deletion ydr073w deletion yjl103c deletion ydr451c deletion yer028c deletion yil038c deletion ynl068c deletion ynl097c deletion ydl020c deletion ydr392w deletion yol148c deletion yol089c deletion yer040w deletion yhl027w deletion yor213c deletion ykl038w deletion ygl071w deletion ynr010w deletion ygl254w deletion yil036w deletion ydr123c deletion yml007w deletion yil101c deletion ygr067c deletion yil084c deletion ygl151w deletion ypr065w deletion ygl166w deletion ygr063c deletion ybr240c deletion yol067c deletion ylr013w deletion ybr239c deletion ymr280c deletion yjl056c deletion yal051w deletion ybr103w deletion ydr463w deletion ypr018w deletion ydl048c deletion ylr278c deletion yjl206c deletion ydr266c deletion ybr033w deletion ylr131c deletion yjr094c deletion yjr140c deletion ybr150c deletion ydr520c deletion ydr009w deletion yor358w deletion ykr101w deletion yer111c deletion yml076c deletion ypl089c deletion ynr063w deletion ykl222c deletion yer088c deletion ygl209w deletion ykl072w deletion ylr136c deletion yhr041c deletion ydl106c deletion ygl197w deletion yml027w deletion ymr075w deletion ygl181w deletion yil130w deletion ygr040w deletion ylr403w deletion ypl254w deletion yil128w deletion ycr065w deletion ybr275c deletion ylr453c deletion yjl089w deletion ylr266c deletion ynl027w deletion ygr288w deletion yer045c deletion yhr124w deletion ypl075w deletion ynl216w deletion ybr049c deletion ygl073w deletion ykl112w deletion ymr043w deletion ABF1OE+ ABF1OE- ADR1OE+ ADR1OE- BYE1OE+ BYE1OE- CAT8OE+ CAT8OE- CRZ1OE+ CRZ1OE- CST6OE+ CST6OE- CUP2OE+ CUP2OE- ECM22OE+ ECM22OE- GAT3OE+ GAT3OE- GAT4OE+ GAT4OE- GCN4-AOE+ GCN4-AOE- GIS1OE+ GIS1OE- GIS2OE+ GIS2OE- GZF3OE+ GZF3OE- HAC1OE+ HAC1OE- HAP4OE+ HAP4OE- HMS1OE+ HMS1OE- HSF1OE+ HSF1OE- INO2OE+ INO2OE- MBP1OE+ MBP1OE- MET31OE+ MET31OE- MET4OE+ MET4OE- MGA1OE+ MGA1OE- MIG1OE+ MIG1OE- MOT3OE+ MOT3OE- MSN2OE+ MSN2OE- MSN4OE+ MSN4OE- PHO4OE+ PHO4OE- PUT3OE+ PUT3OE- RAP1OE+ RAP1OE- RFX1OE+ RFX1OE- RGM1OE+ RGM1OE- RME1OE+ RME1OE- ROX1OE+ ROX1OE- RSC30OE+ RSC30OE- SFP1OE+ SFP1OE- SIP4OE+ SIP4OE- SKN7OE+ SKN7OE- SOK2OE+ SOK2OE- SPS18OE+ SPS18OE- SPT2OE+ SPT2OE- STE12OE+ STE12OE- STP2OE+ STP2OE- STP3OE+ STP3OE- SUT1OE+ SUT1OE- SWI4OE+ SWI4OE- TOS8OE+ TOS8OE- UPC2OE+ UPC2OE- XBP1OE+ XBP1OE- YAP1OE+ YAP1OE- YHP1OE+ YHP1OE- YOX1OE+ YOX1OE- YPR015COE+ YPR015COE- YRR1OE+ YRR1OE- ZAP1OE+ ZAP1OE- WT/adr1+ WT/adr1- WT/bye1+ WT/bye1- WT/cat8+ WT/cat8- WT/crz1+ WT/crz1- WT/cst6+ WT/cst6- WT/cup2+ WT/cup2- WT/ecm22+ WT/ecm22- WT/gat3+ WT/gat3- WT/gat4+ WT/gat4- WT/gcn4+ WT/gcn4- WT/gis1+ WT/gis1- WT/gis2+ WT/gis2- WT/gzf3+ WT/gzf3- WT/hac1+ WT/hac1- WT/hap4+ WT/hap4- WT/hms1+ WT/hms1- WT/ino2+ WT/ino2- WT/mbp1+ WT/mbp1- WT/met31+ WT/met31- WT/mga1+ WT/mga1- WT/mig1+ WT/mig1- WT/mot3+ WT/mot3- WT/msn2+ WT/msn2- WT/msn4+ WT/msn4- Wt/pho4+ Wt/pho4- WT/put3+ WT/put3- WT/rfx1+ WT/rfx1- WT/rgm1+ WT/rgm1- WT/rme1+ WT/rme1- WT/rox1+ WT/rox1- WT/rsc30+ WT/rsc30- WT/sfp1+ WT/sfp1- WT/sip4+ WT/sip4- WT/skn7+ WT/skn7- WT/sok2+ WT/sok2- WT/sps18+ WT/sps18- WT/spt2+ WT/spt2- WT/ste12+ WT/ste12- WT/stp2+ WT/stp2- WT/stp3+ WT/stp3- WT/sut1+ WT/sut1- WT/swi4+ WT/swi4- WT/tos8+ WT/tos8- WT/upc2+ WT/upc2- WT/xbp1+ WT/xbp1- WT/yap1+ WT/yap1- WT/yhp1+ WT/yhp1- WT/yox1+ WT/yox1- WT/ypr015c+ WT/ypr015c- WT/yrr1+ WT/yrr1- WT/zap1+ WT/zap1- SD8_sporulation_DMSO_4hr SD8_sporulation_DMSO_4hr SD5_sporulation_DMSO_1hr SD5_sporulation_DMSO_1hr SB8_sporulation_benomyl_4hr SB8_sporulation_benomyl_4hr SB5_sporulation_benomyl_1hr SB5_sporulation_benomyl_1hr SF5_sporulation_initial_4hr_plus_1hr SF5_sporulation_initial_4hr_plus_1hr SP4_sporulation_initial_4hr SP4_sporulation_initial_4hr YPA_pre_sporulation_control YPA_pre_sporulation_control YPD_general_control YPD_general_control SC5_sporulation_cold_1hr SC5_sporulation_cold_1hr SC8_sporulation_cold_4hr SC8_sporulation_cold_4hr SR4_sporulation_initial_4hr_control_for SC_expt SR4_sporulation_initial_4hr_control_for SC_expt SR5_sporulation_initial_4hr_plus_1hr_control_for_SC5 SR5_sporulation_initial_4hr_plus_1hr_control_for_SC5 SR8_sporulation_control_for_SC8 SR8_sporulation_control_for_SC8 wildtype(YSS37)_T0 wildtype(YSS37)_T30 wildtype(YSS37)_T60 wildtype(YSS37)_T0 wildtype(YSS37)_T30 wildtype(YSS37)_T60 wildtype(YSS37)_T0 wildtype(YSS37)_T30 wildtype(YSS37)_T60 IFH1induced(YSS89)_T0 IFH1induced(YSS89)_T20 IFH1induced(YSS89)_T30 IFH1induced(YSS89)_T40 IFH1induced(YSS89)_T60 IFH1induced(YSS89)_T0 IFH1induced(YSS89)_T20 IFH1induced(YSS89)_T30 IFH1induced(YSS89)_T40 IFH1induced(YSS89)_T60 IFH1induced(YSS89)_T0 IFH1induced(YSS89)_T20 IFH1induced(YSS89)_T30 IFH1induced(YSS89)_T40 IFH1induced(YSS89)_T60 del_gpa2 del_gpa2 del_gpr1 del_gpr1 wt_W303-1A wt_W303-1A del_PMI40_0pt75_g_per_L_initial_mannose del_PMI40_0pt75_g_per_L_initial_mannose del_PMI40_0pt75_g_per_L_initial_mannose del_PMI40_3_g_per_L_initial_mannose del_PMI40_3_g_per_L_initial_mannose del_PMI40_3_g_per_L_initial_mannose del_PMI40_5_g_per_L_initial_mannose del_PMI40_5_g_per_L_initial_mannose del_PMI40_5_g_per_L_initial_mannose del_PMI40_1pt5_g_per_L_initial_mannose del_PMI40_1pt5_g_per_L_initial_mannose del_PMI40_1pt5_g_per_L_initial_mannose del_PMI40_1_g_per_L_initial_mannose del_PMI40_1_g_per_L_initial_mannose del_PMI40_1_g_per_L_initial_mannose BY_haploid BY_haploid BY_haploid RM_haploid RM_haploid RM_haploid BYxRM_diploid BYxRM_diploid BYxRM_diploid BYxRM_diploid BYxRM_diploid BYxRM_diploid Segregant Segregant BY_diploid BY_diploid BY_diploid RM_diploid RM_diploid RM_diploid Segregant_diploid _hybrid Segregant_diploid _hybrid WT_histoneH3H4_rpd3_study WT_histoneH3H4_rpd3_study WT_histoneH3H4_rpd3_study del_rpd3 del_rpd3 H3del(1-28) H3del(1-28) H3(K4,9,14,18,23,27Q) H3(K4,9,14,18,23,27Q) H3(K4,9,14,18,23,27Q) H4del(2-26) H4del(2-26) H4(K5,8,12,16Q) H4(K5,8,12,16Q) del_rpd3_H3del(1-28) del_rpd3_H3del(1-28) del_rpd3_H4(K5,8,12,16Q) del_rpd3_H4(K5,8,12,16Q) H3del(1-28)_CSM H3del(1-28)_CSM H3del(1-28)_CSM H3del(1-28)_CSM H3_wild_type_CSM H3_wild_type_CSM H3_wild_type_CSM H3_wild_type_CSM H4_wild_type_CSM H4_wild_type_CSM H4_wild_type_CSM H4del(2-26)_CSM H4del(2-26)_CSM H4del(2-26)_CSM glucose_pulse_intital_control_t0 glucose_pulse_120sec glucose_pulse_210sec glucose_pulse_300sec glucose_pulse_330sec glucose_pulse_intital_control_t0 glucose_pulse_30sec glucose_pulse_60sec glucose_pulse_120sec glucose_pulse_300sec glucose_pulse_330sec glucose_pulse_intital_control_t0 glucose_pulse_30sec glucose_pulse_60sec glucose_pulse_120sec glucose_pulse_300sec YDR_E1_control YDR_E1_control YDR_E1_control YDR_E1_50percent_dry YDR_E1_50percent_dry YDR_E1_50percent_dry YDR_E1_full_dry YDR_E1_full_dry YDR_E1_full_dry YDR_E1_post_dry_15 YDR_E1_post_dry_15 YDR_E1_post_dry_15 YDR_E1_post_dry_45 YDR_E1_post_dry_45 YDR_E1_post_dry_45 YDR_E1_post_dry_90 YDR_E1_post_dry_90 YDR_E1_post_dry_90 YDR_E1_post_dry_360 YDR_E1_post_dry_360 YDR_E1_post_dry_360 YDR_E2_control YDR_E2_control YDR_E2_control YDR_E2_50percent_dry YDR_E2_50percent_dry YDR_E2_50percent_dry YDR_E2_full_dry YDR_E2_full_dry YDR_E2_full_dry YDR_E2_post_dry_15 YDR_E2_post_dry_15 YDR_E2_post_dry_15 YDR_E2_post_dry_45 YDR_E2_post_dry_45 YDR_E2_post_dry_45 YDR_E2_post_dry_90 YDR_E2_post_dry_90 YDR_E2_post_dry_90 YDR_E2_post_dry_360 YDR_E2_post_dry_360 YDR_E2_post_dry_360 YDR_E3_control YDR_E3_control YDR_E3_control YDR_E3_50percent_dry YDR_E3_50percent_dry YDR_E3_50percent_dry YDR_E3_full_dry YDR_E3_full_dry YDR_E3_full_dry YDR_E3_post_dry_15 YDR_E3_post_dry_15 YDR_E3_post_dry_15 YDR_E3_post_dry_45 YDR_E3_post_dry_45 YDR_E3_post_dry_45 YDR_E3_post_dry_90 YDR_E3_post_dry_90 YDR_E3_post_dry_90 YDR_E3_post_dry_360 YDR_E3_post_dry_360 YDR_E3_post_dry_360 commercial_dry_active_yeast commercial_dry_active_yeast commercial_dry_active_yeast wt_no_treatment_TFIIH_MMS_study wt_MMS ssl1_C406A_MMS ssl1_C406A_no_treatment ssl1_C403A_MMS wt_MMS wt_no_treatment_TFIIH_MMS_study ssl1_C406A_no_treatment ssl1_C403A_no_treatment ssl1_C406A_MMS ssl1_C403A_no_treatment ssl1_C403A_MMS wt_for_fhl1_ifh1_deletions wt_for_fhl1_ifh1_deletions del_fhl1 del_fhl1 del_fhl1_del_ifh1 del_fhl1_del_ifh1 metabolic_cycles_t1 metabolic_cycles_t2 metabolic_cycles_t3 metabolic_cycles_t4 metabolic_cycles_t5 metabolic_cycles_t6 metabolic_cycles_t7 metabolic_cycles_t8 metabolic_cycles_t9 metabolic_cycles_t10 metabolic_cycles_t11 metabolic_cycles_t12 metabolic_cycles_t13 metabolic_cycles_t14 metabolic_cycles_t15 metabolic_cycles_t16 metabolic_cycles_t17 metabolic_cycles_t18 metabolic_cycles_t19 metabolic_cycles_t20 metabolic_cycles_t21 metabolic_cycles_t22 metabolic_cycles_t23 metabolic_cycles_t24 metabolic_cycles_t25 metabolic_cycles_t26 metabolic_cycles_t27 metabolic_cycles_t28 metabolic_cycles_t29 metabolic_cycles_t30 metabolic_cycles_t31 metabolic_cycles_t32 metabolic_cycles_t33 metabolic_cycles_t34 metabolic_cycles_t35 metabolic_cycles_t36 control_for_100ug_ml_treatment 100ug_ml_azinomycin_B control_for_100ug_ml_treatment 100ug_ml_azinomycin_B control_for_10ug_ml_treatment 10ug_ml_azinomycin_B BJ5459_wt_for_spt10 BJ5459_wt_for_spt10 BJ5459_wt_for_spt10 del_spt10 del_spt10 del_spt10 BJ5459_spt10-C388S BJ5459_spt10-C388S BJ5459_spt10-C388S Aerobic_glucose_limited Aerobic_glucose_limited Aerobic_glucose_limited Aerobic_nitrogen_limited Aerobic_nitrogen_limited Aerobic_nitrogen_limited Aerobic_phosphorus_limited Aerobic_phosphorus_limited Aerobic_phosphorus_limited Aerobic_sulfur_limited Aerobic_sulfur_limited Aerobic_sulfur_limited Anaerobic_carbon_limited Anaerobic_nitrogen_limited Anaerobic_nitrogen_limited Anaerobic_nitrogen_limited Anaerobic_phosphorus_limited Anaerobic_phosphorus_limited Anaerobic_phosphorus_limited Anaerobic_sulfur_limited Anaerobic_sulfur_limited Anaerobic_sulfur_limited Anaerobic_carbon_limited Anaerobic_carbon_limited Anaerobic_carbon_limited Aerobic_glucose_limited Aerobic_glucose_limited Aerobic_glucose_limited wt_for_H2B_mutations wt_for_H2B_mutations wt_for_H2B_mutations mutant_histone_H2Bdel(3-32) mutant_histone_H2Bdel(3-32) mutant_histone_H2Bdel(3-32) wt_for_H2B_mutations wt_for_H2B_mutations mutant_histone_H2B(K6,11,16,17,21,22G) mutant_histone_H2B(K6,11,16,17,21,22G) mutant_histone_H2B(K6,11,16,17,21,22G) wt_for_H2B_mutations wt_for_H2B_mutations mutant_histone_H2Bdel(3-37) mutant_histone_H2Bdel(3-37) mutant_histone_H2Bdel(3-37) wt_for_H2B_mutations mutant_histone_H2Bdel(30-37) mutant_histone_H2Bdel(30-37) mutant_histone_H2Bdel(30-37) chitin_study_WT(BY4741) chitin_study_WT(BY4741) chitin_study_WT(BY4741) WT+GlcN_(2hr) WT+GlcN_(2hr) WT+GlcN_(2hr) WT+GlcN_(SS) WT+GlcN_(SS) WT+GlcN_(SS) del_fks1(5251) del_fks1(5251)+GlcN_(2hr) SH100_0H SH100_0H SH100_2H SH100_2H SH100_6H SH100_6H SH121_0H SH121_0H SH121_2H SH121_2H SH121_6H SH121_6H Dough_Fermentation_T0 Dough_Fermentation_T15 Dough_Fermentation_T30 Dough_Fermentation_T60 wt_nonsense-mediated_study1 del_upf1 del_dcp1 del_xrn1_study1 wt_nonsense-mediated_study1 del_upf1 del_nmd2 del_upf3 del_dcp1 del_xrn1_study1 wt_nonsense-mediated_study1 del_upf1 del_nmd2 del_nmd2 del_nmd2 del_upf3 del_upf3 del_upf3 wt_nonsense-mediated_study1 del_dcp1 del_dcp1 del_xrn1_study1 wt_nonsense-mediated_study1 del_upf1 del_dcp1 del_xrn1_study1 wt_nonsense-mediated_study2 del_xrn1_study2 del_xrn1_del_upf1 del_xrn1_del_nmd2 del_xrn1_del_upf3 wt_nonsense-mediated_study2 del_xrn1_study2 del_xrn1_del_upf1 del_xrn1_del_nmd2 del_xrn1_del_upf3 wt_nonsense-mediated_study2 del_xrn1_study2 del_xrn1_del_upf1 del_xrn1_del_nmd2 del_xrn1_del_upf3 wt_nonsense-mediated_study2 del_xrn1_study2 del_xrn1_del_upf1 del_xrn1_del_nmd2 del_xrn1_del_upf3 wt_yra1 wt_yra1 wt_yra1_del_mlp2 wt_yra1_del_mlp2 GFP_yra1(D10K,E11K) GFP_yra1(D10K,E11K) GFP_yra1(D10K,E11K)_del_mlp2 GFP_yra1(D10K,E11K)_del_mlp2 control_amino_acid_starved control_amino_acid_starved amino_acid_starved amino_acid_starved control_butanol_treated control_butanol_treated butanol_treated butanol_treated del_ho_glucose_dr_0pt1 del_ho_glucose_dr_0pt2 del_ho_nitrogen_dr_0pt1 del_ho_nitrogen_dr_0pt2 del_hap4_glucose_dr_0pt1 del_hap4_glucose_dr_0pt2 del_hap4_nitrogen_dr_0pt1 del_hap4_nitrogen_dr_0pt2 control_for_H2O2 control_for_H2O2 H2O2_0pt2mM H2O2_0pt2mM H2O2_2mM H2O2_2mM del_yhb1_t0 del_yhb1_t0 del_yhb1_t0 del_yhb1_t10 del_yhb1_t10 del_yhb1_t30 del_yhb1_t60 del_yhb1_t60 del_yhb1_t120 del_yhb1_t120 del_yap1-yhb1_t0 del_yap1-yhb1_t60 del_msn2-msn4-yhb1_t0 del_msn2-msn4-yhb1_t60 del_yhb1_t60_1mM del_yhb1_t60_0pt1mM BY4741_del_yhb1_t0 BY4741_del_yhb1_t60 rho0_del_yhb1_t0 rho0_del_yhb1_t60 N-limited_ammonium N-limited_ammonium N-limited_ammonium non_N-limited_control non_N-limited_control non_N-limited_control N-limited_glutamine N-limited_glutamine N-limited_glutamine N-limited_alanine N-limited_alanine N-limited_alanine doxycycline_10hr doxycycline_24hr doxycycline_2hr doxycycline_4hr before_doxycycline before_doxycycline before_doxycycline doxycycline_10hr doxycycline_24hr doxycycline_2hr doxycycline_4hr before_doxycycline FUM1 fum1_del fum1_H153R fum1_K187R FUM1_U fum1_vect Affymetrix_yeast_demo Affymetrix_yeast_demo lcb1-100_t0 lcb1-100_t15 lcb1-100_t15 lcb1-100_t0 lcb1-100_t15 lcb1-100_t30 lcb1-100_t60 rh406_t0 rh406_t15 rh406_t30 rh406_t60 rh406_t0 rh406_t15 ir_and_uv_control ir_and_uv_control ir_and_uv_control ir_t30 ir_t60 ir_t120 ir_t240 uv_t30 uv_t60 uv_t120 uv_t240 cisplatin_and_H2O2_control cisplatin_and_H2O2_control cisplatin_and_H2O2_control cisplatin_t0 cisplatin_t30 cisplatin_t60 cisplatin_t120 H2O2_t0 H2O2_t30 H2O2_t60 H2O2_t120 control_BY4741_MD rapamycin_1nm_BY4741 cyclohexamide_BY4741 camptothesin_BY4741 nocodazole_BY4741 rapamycin_3nm_BY4741 fluconazole_BY4741 del_hsl1 del_azf1_glucose del_azf1_glucose del_azf1_glucose del_azf1_glycerol_lactate del_azf1_glycerol_lactate del_azf1_glycerol_lactate wt_azf1_glucose wt_azf1_glucose wt_azf1_glucose wt_azf1_glycerol_lactate wt_azf1_glycerol_lactate wt_azf1_glycerol_lactate minimal_media_haploinsufficiency minimal_media_haploinsufficiency YPD_haploinsufficiency YPD_haploinsufficiency YPD_haploinsufficiency YPD_haploinsufficiency YPD_haploinsufficiency YPD_haploinsufficiency del_isc1_t0 wt_isc1_t0 del_isc1_t15 wt_isc1_t15 del_isc1_t0 del_isc1_t15 wt_isc1_t0 wt_isc1_t15 del_upf1_t0 del_upf1_thiolutin_t2 del_upf1_thiolutin_t4 del_upf1_thiolutin_t6 del_upf1_thiolutin_t8 del_upf1_thiolutin_t10 del_upf1_thiolutin_t12 del_upf1_thiolutin_t15 del_upf1_thiolutin_t20 del_upf1_thiolutin_t25 del_upf1_thiolutin_t30 del_upf1_thiolutin_t35 del_upf1_thiolutin_t40 del_upf1_thiolutin_t45 del_upf1_thiolutin_t50 del_upf1_thiolutin_t60 del_upf1_t0 del_upf1_thiolutin_t2 del_upf1_thiolutin_t4 del_upf1_thiolutin_t6 del_upf1_thiolutin_t8 del_upf1_thiolutin_t10 del_upf1_thiolutin_t12 del_upf1_thiolutin_t15 del_upf1_thiolutin_t20 del_upf1_thiolutin_t25 del_upf1_thiolutin_t30 del_upf1_thiolutin_t35 del_upf1_thiolutin_t40 del_upf1_thiolutin_t45 del_upf1_thiolutin_t50 del_upf1_thiolutin_t60 del_upf1_t0 del_upf1_thiolutin_t2 del_upf1_thiolutin_t4 del_upf1_thiolutin_t6 del_upf1_thiolutin_t8 del_upf1_thiolutin_t10 del_upf1_thiolutin_t12 del_upf1_thiolutin_t15 del_upf1_thiolutin_t20 del_upf1_thiolutin_t25 del_upf1_thiolutin_t30 del_upf1_thiolutin_t35 del_upf1_thiolutin_t40 del_upf1_thiolutin_t45 del_upf1_thiolutin_t50 del_upf1_thiolutin_t60 wt_S288C_t0 wt_S288C_thiolutin_t2 wt_S288C_thiolutin_t4 wt_S288C_thiolutin_t6 wt_S288C_thiolutin_t8 wt_S288C_thiolutin_t10 wt_S288C_thiolutin_t12 wt_S288C_thiolutin_t15 wt_S288C_thiolutin_t20 wt_S288C_thiolutin_t25 wt_S288C_thiolutin_t30 wt_S288C_thiolutin_t35 wt_S288C_thiolutin_t40 wt_S288C_thiolutin_t45 wt_S288C_thiolutin_t50 wt_S288C_thiolutin_t60 wt_S288C_t0 wt_S288C_thiolutin_t2 wt_S288C_thiolutin_t4 wt_S288C_thiolutin_t6 wt_S288C_thiolutin_t8 wt_S288C_thiolutin_t10 wt_S288C_thiolutin_t12 wt_S288C_thiolutin_t15 wt_S288C_thiolutin_t20 wt_S288C_thiolutin_t25 wt_S288C_thiolutin_t30 wt_S288C_thiolutin_t35 wt_S288C_thiolutin_t40 wt_S288C_thiolutin_t45 wt_S288C_thiolutin_t50 wt_S288C_thiolutin_t60 wt_S288C_t0 wt_S288C_thiolutin_t2 wt_S288C_thiolutin_t4 wt_S288C_thiolutin_t6 wt_S288C_thiolutin_t8 wt_S288C_thiolutin_t10 wt_S288C_thiolutin_t12 wt_S288C_thiolutin_t15 wt_S288C_thiolutin_t20 wt_S288C_thiolutin_t25 wt_S288C_thiolutin_t30 wt_S288C_thiolutin_t35 wt_S288C_thiolutin_t40 wt_S288C_thiolutin_t45 wt_S288C_thiolutin_t50 wt_S288C_thiolutin_t60 BMA64_wildtype BMA64_wildtype BMA64_wildtype BMA64_wildtype BMA64_wildtype BMA64_del_rnt1 BMA64_del_rnt1 BMA64_del_rnt1 BMA64_del_rnt1 evolved_strain_aerobic_only_xylose evolved_strain_aerobic_only_xylose evolved_strain_aerobic evolved_strain_aerobic evolved_strain_anaerobic evolved_strain_anaerobic TMB3001_aerobic TMB3001_aerobic TMB3001_anaerobic TMB3001_anaerobic del_sgs del_sgs del_sgs_with_mms del_sgs_with_mms aging_study_wild_type aging_study_wild_type wild_type_with_mms wild_type_with_mms dilution_rate_0pt02 dilution_rate_0pt05 dilution_rate_0pt1 dilution_rate_0pt1 dilution_rate_0pt1 dilution_rate_0pt2 dilution_rate_0pt2 dilution_rate_0pt2 dilution_rate_0pt25 dilution_rate_0pt33 dilution_rate_0pt33 dilution_rate_0pt33 Ty1_VLP_cytoplasmic_control Ty1_VLP_cytoplasmic_control wt_for_abf1_37degC wt_for_abf1_37degC wt_for_abf1_37degC abf1_ts_37degC abf1_ts_37degC abf1_ts_37degC wt_for_rap1_37degC wt_for_rap1_37degC wt_for_rap1_37degC rap1_ts_37degC rap1_ts_37degC rap1_ts_37degC wt_for_edc3_study wt_for_edc3_study wt_for_edc3_study wt_for_edc3_study del_edc3 del_edc3 del_edc3 del_edc3 control_for_pyocyanin pyocyanin_25ug/mL control_for_pyocyanin pyocyanin_25ug/mL pyocyanin_250ug/mL pyocyanin_250ug/mL 12degC_C_lim 12degC_C_lim 12degC_C_lim 30degC_C_lim 30degC_C_lim 30degC_C_lim 12degC_N_lim 12degC_N_lim 12degC_N_lim 30degC_N_lim 30degC_N_lim 30degC_N_lim wt_for_del_cbc2 wt_for_del_cbc2 wt_for_del_cbc2 del_cbc2 del_cbc2 del_cbc2 wt_asf1 wt_asf1 del_asf1 del_asf1 std_medium_cenpk std_medium_cenpk std_medium_RS std_medium_RS VHG_cenpk_5hr VHG_cenpk_5hr VHG_RS_5hr VHG_RS_5hr VHG_cenpk_48hr VHG_cenpk_48hr VHG_RS_48hr VHG_RS_48hr wt_taf10 wt_taf10 del_taf10_del_72 del_taf10_del_92 del_taf10_chim_38 del_taf10_chim_97 del_taf10_chim_98 BY4742_3days_YPD_quiescent BY4742_3days_YPD_quiescent BY4742_3days_YPD_quiescent_plus_10min_2%glucose BY4742_3days_YPD_quiescent_plus_10min_2%glucose del_stb3_3days_YPD_quiescent del_stb3_3days_YPD_quiescent del_stb3_3days_YPD_quiescent_plus_10min_2%glucose del_stb3_3days_YPD_quiescent_plus_10min_2%glucose empty_vector_pdr1_study empty_vector_pdr1_study empty_vector_pdr1_study pdr1-cyc8_fusion pdr1-cyc8_fusion pdr1-cyc8_fusion del_pdr1 del_pdr1 del_pdr1 pdr1-cyc8_fusion_del_pdr1 pdr1-cyc8_fusion_del_pdr1 pdr1-cyc8_fusion_del_pdr1 pdr1-sin3_fusion pdr1-sin3_fusion pdr1-sin3_fusion wild_type_initial_mre11_study wild_type_meiosis_4hrs del_mre11_initial del_mre11_meiosis_4hrs del_rad50_initial del_rad50_meiosis_4hrs spo11(Y135F)_initial spo11(Y135F)_meiosis_4hrs C_lim_aerobic_chemostat_with_ASN C_lim_aerobic_chemostat_with_ASN C_lim_aerobic_chemostat_with_ASN C_lim_aerobic_chemostat_with_Proline C_lim_aerobic_chemostat_with_Proline C_lim_aerobic_chemostat_with_Proline C_lim_aerobic_chemostat_with_leucine C_lim_aerobic_chemostat_with_leucine C_lim_aerobic_chemostat_with_leucine C_lim_aerobic_chemostat_with_phenylalanine C_lim_aerobic_chemostat_with_phenylalanine C_lim_aerobic_chemostat_with_phenylalanine C_lim_aerobic_chemostat_with_methionine C_lim_aerobic_chemostat_with_methionine C_lim_aerobic_chemostat_with_methionine wt_for_H3(K4,79R) wt_for_H3(K4,79R) wt_for_H3(K4,79R) Mutant_Histone_H3(K4,79R) Mutant_Histone_H3(K4,79R) Mutant_Histone_H3(K4,79R) wt_for_H3(K4,36,79R)_0hr wt_for_H3(K4,36,79R)_0hr Mutant_Histone_H3(K4,36,79R)_0hr Mutant_Histone_H3(K4,36,79R)_0hr wt_for_H3(K4,36,79R)_6hr wt_for_H3(K4,36,79R)_6hr wt_for_H3(K4,36,79R)_6hr Mutant_Histone_H3(K4,36,79R)_6hr Mutant_Histone_H3(K4,36,79R)_6hr Mutant_Histone_H3(K4,36,79R)_6hr wt_for_H3(K4,36,79R)_9hr wt_for_H3(K4,36,79R)_9hr Mutant_Histone_H3(K4,36,79R)_9hr Mutant_Histone_H3(K4,36,79R)_9hr wt_asf1_t0 mutant_asf1_t0 wt_asf1_t1 mutant_asf1_t1 wt_asf1_t2 mutant_asf1_t2 wt_asf1_t3 mutant_asf1_t3 wt_asf1_t4 mutant_asf1_t4 wt_asf1_t0 mutant_asf1_t0 wt_asf1_t1 mutant_asf1_t1 wt_asf1_t2 mutant_asf1_t2 wt_asf1_t3 mutant_asf1_t3 wt_asf1_t4 mutant_asf1_t4 wt_asf1_t0 mutant_asf1_t0 wt_asf1_t1 mutant_asf1_t1 wt_asf1_t2 mutant_asf1_t2 wt_asf1_t3 mutant_asf1_t3 wt_asf1_t4 mutant_asf1_t4 mutant_eIF5A(V81G)_strain mutant_eIF5A(V81G)_strain mutant_eIF5A(V81G)_strain mutant_eIF5A(V81G)_strain wild-type_eIF5A_strain wild-type_eIF5A_strain wild-type_eIF5A_strain wild-type_eIF5A_strain diploid_sample diploid_sample diploid_sample amphotericin_B amphotericin_B caspofungin caspofungin 5-fluorocytosine 5-fluorocytosine ketoconazole ketoconazole DMSO_control DMSO_control wt_tbp1_wt_sua7 wt_tbp1_sua7(E202G) tbp1(E186D)_wt_sua7 tbp1(E186D)_sua7(E202G) tbp1(I143N)_wt_sua7 tbp1(I143N)_sua7(E202G) kin28_0min kin28_60min pog1_0min pog1_60min ethanol_limited_chemostat ethanol_limited_chemostat ethanol_limited_chemostat acetate_limited_chemostat acetate_limited_chemostat acetate_limited_chemostat maltose_limited_chemostat maltose_limited_chemostat maltose_limited_chemostat prolonged_aerobic_maltose_limited_chemostat prolonged_aerobic_maltose_limited_chemostat prologued_aerobic_glucose_limited_chemostat prologued_aerobic_glucose_limited_chemostat prologued_aerobic_glucose_limited_chemostat anaerobic_glucose_limited_chemostat_100%CO2 anaerobic_glucose_limited_chemostat_100%CO2 anaerobic_glucose_limited_chemostat_100%CO2 aerobic_glucose_limited_chemostat_79%CO2 aerobic_glucose_limited_chemostat_79%CO2 aerobic_glucose_limited_chemostat_79%CO2 aerobic_nitrogen_limited_chemostat_79%CO2 aerobic_nitrogen_limited_chemostat_79%CO2 aerobic_nitrogen_limited_chemostat_79%CO2